Publications

List of my publications

42. Genes, environment, and “bad luck”, M A Nowak, B Waclaw, Science 355 (6331), 1266-1267 (2017).

41. Mechanical interactions in bacterial colonies and the surfing probability of beneficial mutations, FF Farrell, M Gralka, O Hallatschek, B Waclaw, Journal of The Royal Society Interface 14, 20170073 (2017).

40. An exactly solvable, spatial model of mutation accumulation in cancer, Chay Paterson, Martin A Nowak, Bartlomiej Waclaw, Scientific Reports 6, 39511 (2016).

39. Beyond the Hypercube: Evolutionary Accessibility of Fitness Landscapes with Realistic Mutational Networks, M Zagorski, Z Burda, B Waclaw, PLOS Comp. Biol. 12, e1005218 (2016).

38. Evolution of Drug Resistance in Bacteria, B Waclaw, Biophysics of Infection, 49-67 (2016).

37. Antibiotic resistance: a physicist’s view, R Allen, B Waclaw, Physical Biology 13 (4), 045001 (2016).

36. Allele Surfing Promotes Microbial Adaptation from Standing Variation, M Gralka, F Stiewe, F Farrell, W Moebius, B Waclaw, O Hallatschek, Ecology Letters, doi:10.1111/ele.12625 (2016).

35. Phenotypic switching can speed up biological evolution of microbes, A.C Tadrowski, M.R Evans, and B. Waclaw, arXiv preprint arXiv:1601.04600 (2016).

34. A simple non-equilibrium, statistical-physics toy model of thin-film growth, J. K. Ochab, H. Nagel, W. Janke, and B. Waclaw, J. Stat. Mech. (2015) P09013.

33. Condensation in models with factorized and pair-factorized stationary states, M. R. Evans, B. Waclaw, J. Stat. Mech. P09005 (2015).

32. Spatial model predicts dispersal and cell turnover cause reduced intra-tumor heterogeneity
B. Waclaw , I. Bozic , M. E Pittman , R. H Hruban , B. Vogelstein , M. A. Nowak, Nature 525, 261-264 (2015). See also here for a very nice News & Views article by N. Komarova.

31. Lower glycolysis carries a higher flux than any biochemically possible alternative, S. J. Court, B. Waclaw, R. J. Allen, Nature Communications 6 (2015),8427, doi:10.1038/ncomms9427.

30. Condensation in stochastic mass transport models: beyond the zero-range process, M.R. Evans, B Waclaw, Journal of Physics A: Mathematical and Theoretical 47, 095001 (2014).

29. The role of mechanical forces in the planar-to-bulk transition in growing Escherichia coli microcolonies, M.A.A. Grant, B. Waclaw, R.J. Allen, P. Cicuta, J. R. Soc. Interface. 11 (97), 20140400 (2014).

28. An exclusion process on a tree with constant aggregate hopping rate, P. Mottishaw, B. Waclaw, M.R. Evans, J. Phys. A: Math. Theor. 46, 405003 (2013)

27. Mechanically driven growth of quasi-two dimensional microbial colonies, F.D.C. Farrell, O. Hallatschek, D. Marenduzzo, B. Waclaw, Phys. Rev. Lett. 111, 168101 (2013); click here for a synopsis in Physics; and here for a news article in Physics World.

26. Quantum widening of CDT universe,  L. Bogacz , Z. Burda , B. Waclaw,  Phys. Rev. D 86, 104015 (2012)

25. Mutational pathway determines whether drug gradients accelerate evolution of drug-resistant cells,  P. Greulich , B. Waclaw , R. J. Allen,  Phys. Rev. Lett. 109, 088101 (2012); see also a viewpoint article: Bacteria Evolve to Go Against the Grain, O. Hallatschek, Physics 5, 93 (2012).

24. Stochastic Description of a Bistable Frustrated Unit,  A. Garai , B. Waclaw , H. Nagel , H. Meyer-Ortmanns,  J. Stat. Mech. P01009 (2012)

23. Explosive condensation in a mass transport model,  B. Waclaw , M. R. Evans,  Phys. Rev. Lett. 108, 070601 (2012)

22. Random matrices and localization in the quasispecies theory,  B. Waclaw,  Acta Physica Polonica B 42, 1141 (2011)

21. Dynamical phase transition in a model for evolution with migration,  B. Waclaw , R. J. Allen , M. R. Evans,  Phys. Rev. Lett. 105, 268101 (2010)

20. The various facets of random walk entropy,  Z. Burda , J. Duda , J.M. Luck , B. Waclaw,  Acta Phys. Polon. B 41, 949 (2010)

19. Spectrum of the Product of Independent Random Gaussian Matrices,  Z. Burda , R. A. Janik , B. Waclaw,  Phys. Rev. E 81, 041132 (2010)

18. Mass condensation in one dimension with pair-factorized steady states,  B. Waclaw , J. Sopik , W. Janke , H. Meyer-Ortmanns,  J. Stat. Mech. P10021 (2009)

17. Pair-factorized steady states on arbitrary graphs,  B. Waclaw , J. Sopik , W. Janke , H. Meyer-Ortmanns,  J. Phys. A: Math. Theor. 42, 315003 (2009)

16. Tuning the shape of the condensate in spontaneous symmetry breaking,  B. Waclaw , J. Sopik , W. Janke , H. Meyer-Ortmanns,  Phys. Rev. Lett. 103, 080602 (2009)

15. Localization of maximal entropy random walk,  Z. Burda , J. Duda , J. M. Luck , B. Waclaw,  Phys. Rev. Lett. 102, 160602 (2009)

14. Approaching the thermodynamic limit in equilibrated scale-free networks,  B. Waclaw , L.Bogacz , W. Janke,  Phys. Rev. E 78, 061125 (2008)

13. Power laws in zero-range processes on random networks,  B. Waclaw , Z. Burda , W. Janke,  Eur. Phys. J. B 65, 565 (2008)

12. Counting metastable states of Ising spin glasses on arbitrary graphs,  B. Waclaw , Z. Burda,  Phys. Rev. E 77, 041114 (2008)

11. Free zero-range processes on networks,  L. Bogacz , Z. Burda , W. Janke , B. Waclaw,  Proceedings of SPIE – Volume 6601, 66010V (2007)

10. Condensation in zero-range processes on inhomogeneous networks,  B. Waclaw, L. Bogacz, Z. Burda, W. Janke,  Phys. Rev. E 76, 046114 (2007)

9. Balls-in-boxes condensation on networks,  L. Bogacz , Z. Burda , W. Janke , B. Waclaw,  Chaos 17, 026112 (2007)

8. Finite size effects in Barabasi-Albert growing networks,  B. Waclaw , I. M. Sokolov,  Phys. Rev. E 75, 056114 (2007)

7. Spectral properties of empirical covariance matrices for data with power-law tails,  Z. Burda , A. Goerlich , B. Waclaw,  Phys. Rev. E 74, 041129 (2006)

6. Eigenvalue density of empirical covariance matrix for correlated samples,  Z. Burda , J. Jurkiewicz , B. Waclaw,  Acta Phys. Pol. B 36, 2641 (2005)

5. Correlated Wishart Matrices and Critical Horizons,  Z. Burda , A. Goerlich , J. Jurkiewicz , B. Waclaw,  Eur. Phys. J. B 49, 319 (2006)

4. A program generating homogeneous random graphs with given weights,  L. Bogacz , Z. Burda , W. Janke , B. Waclaw,  Comp. Phys. Comm. 173, 162-174 (2005)

3. Causal and homogeneous networks,  P. Bialas , Z. Burda , B. Waclaw,  AIP Conf. Proc. 776, 14 (2005)

2. Homogeneous complex networks,  L. Bogacz , Z. Burda , B. Waclaw,  Physica A, 366, 587 (2006).

1. Spectral Moments of Correlated Wishart Matrices,  Z. Burda , J. Jurkiewicz , B. Waclaw,  Phys. Rev. E 71, 026111 (2005)

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